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Influenza A (H5) Virus RNA, Qualitative Real-Time PCR, Respiratory and Conjunctiva

Test codes: 18201, 18203 

Avian influenza, or bird flu, refers to the disease caused by infection with avian (bird) influenza (flu) type A viruses. Bird flu viruses do not normally infect humans. However, sporadic human infections with bird flu viruses have occurred.

H5 bird flu is widespread in wild birds worldwide and causes outbreaks in US poultry and dairy cows, with several recent human cases.

While the current public health risk is low, the Centers for Disease Control and Prevention (CDC) is watching the situation carefully and working with states to monitor people with animal exposures.

As stated by the Centers for Disease Control and Prevention (CDC), “People who have H5 bird flu symptoms and who have had recent exposure to A H5 virus infected (or suspected to be infected) birds, dairy cows, other animals, animal byproducts (eg, raw milk) or sick people should be tested.” More information can be found at the following CDC website: Testing for Influenza A(H5) Virus Infection | Bird Flu | CDC.1

Quest offers 2 tests that can be used when an individual is suspected of having avian influenza (H5). The 2 tests differ based on the specimen type: respiratory vs conjunctiva.

  • Influenza A and B RNA, Qualitative Real-Time PCR, Respiratory with Reflex to H5 (test code 18201)
  • Influenza A and B RNA, Qualitative Real-Time PCR, Conjunctiva with Reflex to H5 (test code 18203)

These tests are qualitative molecular diagnostic tests that detect the influenza A H5 virus, including H5N1, commonly known as avian influenza. These tests also detect influenza B, but do not detect other respiratory viruses. The tests are intended to be performed on their indicated specimen type (respiratory vs conjunctiva) collected from individuals suspected of infection with influenza A H5 or from those who meet the Centers for Disease Control and Prevention (CDC) clinical and/or epidemiological criteria for influenza A H5 testing.

Influenza A and B RNA, Qualitative Real-Time PCR, Respiratory with Reflex to H5 (test code 18201)

Preferred:

• Nasopharyngeal, anterior nares, or oropharyngeal swab submitted in 1 mL VCM (green cap) or equivalent (UTM) tube

OR

• 1 mL bronchial alveolar lavage (BAL)/wash collected in a sterile, leak-proof container

Influenza A and B RNA, Qualitative Real-Time PCR, Conjunctiva with Reflex to H5 (test code 18203)

Preferred: 

•  Conjunctiva swab submitted in 1 mL VCM (green-cap) or equivalent (UTM) tube 

Instructions for both 18201 and 18203: Each specimen should be accompanied by its own separate requisition and transport container in its own sealed bag, which may differ from specimen collection instructions for testing performed at other laboratories

Specimens should be transported refrigerated (cold packs). Frozen specimens are also acceptable. 

The assay used to detect influenza A/B is an FDA-cleared assay. If positive, the reflex assay used for H5 subtyping is an immediate-response test. The immediate-response tests have not been reviewed or authorized by the FDA. They were developed and their analytical performance characteristics were determined by Quest Diagnostics pursuant to CLIA regulations for clinical purposes. These tests can only be ordered by a licensed healthcare professional (for prescription use only).

Performance characteristics are listed in Table 1. Studies were conducted in the R&D Infectious Disease and Molecular Infectious Disease Department at Quest Diagnostics Nichols Institute, 33608 Ortega Highway, San Juan Capistrano, California 92675.

Click the table to open in new window (enlarged)

Influenza antivirals are available and may be used to treat seasonal or avian flu.

Candidate vaccines to prevent H5 infection have been developed, but they are not available for widespread use. Seasonal influenza vaccine does not protect against H5.2

For details, visit the following CDC website: Treatment of Bird Flu | Bird Flu | CDC.3

Quest has several testing options available that can subtype influenza A and detect other respiratory viruses (Table 2). Quest offers assays that will also type for the seasonal human influenza strains (ie, H1 and H3).

The influenza A subtyping tests (95512 and 37444) will not specifically identify an influenza A strain as H5 but would identify such a strain as a non-typeable influenza A strain.

Click the tbale to open in new window (enlarged)

Reference

  1. Centers for Disease Control and Prevention (CDC). Testing for Influenza A(H5) Virus Infection. Updated May 20, 2025. Accessed March 23, 2026. https://www.cdc.gov/bird-flu/hcp/case-definition/?CDC_AAref_Val=https://www.cdc.gov/flu/avianflu/case-definitions.html
  2.  Centers for Disease Control and Prevention (CDC). Treatment of Bird Flu. Updated April 23, 2025. Accessed March 25, 2026. https://www.cdc.gov/bird-flu/prevention/index.html
  3.  Centers for Disease Control and Prevention (CDC). Treatment of Bird Flu. Updated May 2, 2025. Accessed March 23, 2026. https://www.cdc.gov/bird-flu/treatment/index.html

 

This FAQ is provided for informational purposes only and is not intended as medical advice. A physician’s test selection and interpretation, diagnosis, and patient management decisions should be based on the physician’s education, clinical expertise, and assessment of the patient.

 

Document FAQS.315 Version: 3

Version 3 effective 05/11/2026 to present

Version 2 effective 03/31/2025 to 05/11/2026 

Version 1 effective 02/05/2025 to 03/31/2025

Version 0 effective 10/28/2024 to 02/05/2025